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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.14G047000.1.p |
Common Name | GLYMA_14G047000, LOC100791704 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
TALE |
Protein Properties |
Length: 326aa MW: 37172.1 Da PI: 6.7084 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.14G047000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 29.6 | 1.2e-09 | 255 | 289 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yps+++++ LA+++gL+ +q+ +WF N+R ++
Glyma.14G047000.1.p 255 KWPYPSESQKQALAESTGLDLKQINNWFINQRKRH 289
569*****************************885 PP
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2 | ELK | 38.4 | 2.7e-13 | 209 | 230 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK qLlrKYsgyLgsLk+EF+
Glyma.14G047000.1.p 209 ELKVQLLRKYSGYLGSLKKEFL 230
9********************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MIGFGGNSCS ELSEMDMMNM ETNNRKFLSL PLSNNNNNSG NAQMRSSSDN RRVPVTSNSN 60 IAQEHHYSHH NPTDTCSVRD KIMAHPLFPR LLSSYLNCLK VGAPPEVVAS LEESCAKCES 120 FNASSGRTGG SIGEDPALDQ FMEAYCEMLI KYEQELTKPF KEAMLFFSRI ECQLKALAVS 180 SDFGQSETSS QNEVDVHENN LDSQAEDREL KVQLLRKYSG YLGSLKKEFL KKKKNGKLPK 240 EARQQLLDWW NRHYKWPYPS ESQKQALAES TGLDLKQINN WFINQRKRHW KPSEDMQFAV 300 MDATNYYMEN VMCKPFPMDG MPMLL*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: First expressed in the embryo proliferation stage, increases during early somatic embryo development and decreases thereafter. |
Uniprot | TISSUE SPECIFICITY: Expressed mainly in embryonic tissues. Weakly detected in stems and hypocotyl. |
Functional Description ? help
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Source |
Description |
UniProt | Possible transcription activator involved in early embryonic development. Probably binds to the DNA sequence 5'-TGAC-3'. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF128061 | 0.0 | EF128061.1 Medicago truncatula class I KNOX homeobox transcription factor (KNOX6) mRNA, complete cds. |
GenBank | GU461604 | 0.0 | GU461604.1 Medicago truncatula KNOX6 variant a mRNA, complete cds, alternatively spliced. |