PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G032200.1.p
Common NameGLYMA_14G032200, LOC100811345
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 563aa    MW: 62105 Da    PI: 7.4111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G032200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.25.3e-17364410455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           hn+ ErrRRdriN+++ +L++l+P++      K +Ka++Le+A+eY+ksLq
  Glyma.14G032200.1.p 364 VHNQSERRRRDRINEKMRTLQQLIPNS-----NKTDKASMLEEAIEYLKSLQ 410
                          6*************************7.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.41E-18356414No hitNo description
SuperFamilySSF474592.88E-20357423IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-18357417IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088818.368360409IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-14364410IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-17366415IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    Send to blast
MKNSIPGLDF ESDACLTNQR KLIGPDQELV ELLWQNGQVV RHNQTHRKPL GNSSNLRQAQ  60
KTDHSTLRSS GPYGNSSNLD QEEATPWIQF PLEDPLEQDF CSNLLSELPP TCEFESYKPI  120
KQLEEDKFTN FFASSTPHHP TTSSSKPLPP NMTSSWVQRI QGNPNPMPAP RFHVPDSSQK  180
DNDLGASRKV LNFPHFSTPR NNVSSAPGST QFREKTTANL SQSEAREYSV ITVGSSHCGS  240
SHIPQEKDVS RVSSSAVWAT NNNNSLSAEP EAVRDCVQRP ICPRSDKGKS EMIEPTVTSS  300
SGGSGSTGIG RTCSLSTRDH GQKRKGTEEE ASEEQSEATE LKSADGNKAS QRTGSSKRNR  360
AAEVHNQSER RRRDRINEKM RTLQQLIPNS NKTDKASMLE EAIEYLKSLQ FQLQVMWMGS  420
GMTPVMFPGI QHYMSQMGMG MGAPSLPSIY NPMQLPKVPH DQAMSVPQMP NQNLMCQNQV  480
LGAFNYQTHM QNPCLPEQYA PYMGYHFMRS ASQPMNVFRY GSQAVQHSQT MIAPGNNSSG  540
PMSGTANIDD AVSGKAGSST FN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1368373ERRRRD
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.502950.0cotyledon| flower| hypocotyl| leaf
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G032200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006595762.10.0transcription factor PIF4
TrEMBLI1M7180.0I1M718_SOYBN; Uncharacterized protein
STRINGGLYMA14G03600.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF81462944
Representative plantOGRP25816128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.42e-38phytochrome interacting factor 3-like 6