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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.14G000400.1.p |
Common Name | GLYMA_14G000400, LOC100793442 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
FAR1 |
Protein Properties |
Length: 778aa MW: 89353 Da PI: 6.2447 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.14G000400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 100 | 2.4e-31 | 70 | 161 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk++++gkw v+ ++ eHnHel
Glyma.14G000400.1.p 70 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKMQDSGKWIVSGFVREHNHEL 159
9***************************************998888545677889*********************************** PP
FAR1 90 ap 91
+p
Glyma.14G000400.1.p 160 VP 161
86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 778 aa
Download sequence Send
to blast |
MDNEVEVLEF DIGLGGGEGE YDDDDGGGID EEELGVATGG GEIYLPEGDL LDLEPCEGME 60 FESEEAAKAF YNSYARRVGF STRVSSSRRS RRDGAIIQRQ FVCAKEGFRN LNEKRTKDRE 120 IKRPRTITRV GCKASLSVKM QDSGKWIVSG FVREHNHELV PPDQVHCLRS HRQISGAAKT 180 LIDTLQAAGM GPRRIMSALI KEYGGISKVG FTEVDCRNYM RNNRLRSLEG DIQLVLDYLR 240 QMHAENPNFF YAVQGDEDQS ITNVFWADPK ARMNYTFFGD TVTFDTTYRS NRYRLPFAPF 300 TGVNHHGQPV LFGCAFLINE SEASFVWLFK TWLMAMSGRP PVSITTDHDS VIRSAIIQVF 360 PETRHRFCKW HIFKKCQEKL SHIFLQYPNF EAEFHKCVNL TESTEEFESC WSTLVDKYDL 420 RDHEWLQAIY SSCRQWVPVY LRDTFFAEMS ITQRSDSMNS YFDGYINAST NLSQFFKLYE 480 KALESRNEKE VRADYDTMNT LPVLRTPSPM EKQASELYTR KIFMRFQEEL VGTLTLMASK 540 ADDDGEVITY HVAKYGEDHK GYCVKFNVLE MKATCSCQMF EFSGLLCRHV LAVFRVTNVL 600 TLPSHYILKR WTRNAKSNVI LEEHACDVYT YYLESHIVRY NTLRHEAFKF VDEGARSAET 660 YDVAMDALQE AAKRVSQGMQ NEGKIPINNG KVRSHVLNDE SHANYTSGCQ EESLSQHMSK 720 DDLDKNIRKL MNELECANRK CEIYRSNLLS VLKAVEDHKL ELSVKVENIK ISMKDGI*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |