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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.13G344100.1.p |
| Common Name | GLYMA_13G344100, LOC100813124 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
FAR1 |
| Protein Properties |
Length: 257aa MW: 29646.4 Da PI: 6.5166 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.13G344100.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 83 | 5.1e-26 | 79 | 169 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHe 88
+fY +Y+++vGF+vr++++++s+ n++++ ++fvCskeg+r+++ ++ + r + + tr gC+a++++ +++ gkw+vtk+++eH+H+
Glyma.13G344100.1.p 79 EFYIAYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHR-RDRVlpPPPATREGCQAMIRLALRDGGKWVVTKFVKEHTHK 167
6******************************************98882.2222458899******************************* PP
FAR1 89 la 90
l+
Glyma.13G344100.1.p 168 LM 169
97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MDHQSGQGFN SDDSDLDMQA EISEKHKKVD EFSKNLELCG SEDEMFVEIE QPLANISTDI 60
EAVEPFIGME FNSREEAREF YIAYGRRVGF TVRIHHNRRS RVNNQVIGQD FVCSKEGFRA 120
KKYVHRRDRV LPPPPATREG CQAMIRLALR DGGKWVVTKF VKEHTHKLMS PSKVPWRGSG 180
KHLVSEDEKD KRIRELSLEL YNERQKCKRR CAAYEEQLNM ILNDLEKHTE HISEKVAAVV 240
RSIREIEEEI SDSDGG*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
