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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.13G339900.1.p |
Common Name | GLYMA_13G339900, LOC100799410 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 332aa MW: 37291.7 Da PI: 5.8782 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.13G339900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 49 | 1.4e-15 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEd++l ++ +G g+W+ +ar g+ R++k+c++rw +yl
Glyma.13G339900.1.p 21 KGLWSPEEDDKLMNYMLNHGQGCWSDVARNAGLQRCGKSCRLRWINYL 68
678*******************************************97 PP
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2 | Myb_DNA-binding | 50.6 | 4.4e-16 | 74 | 117 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E+el+++ + +lG++ W+ Ia++++ gRt++++k++w++
Glyma.13G339900.1.p 74 RGAFSPQEEELIIHFHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 117
89********************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MRKPEACNNN TKNNSNKKLR KGLWSPEEDD KLMNYMLNHG QGCWSDVARN AGLQRCGKSC 60 RLRWINYLRP DLKRGAFSPQ EEELIIHFHS LLGNRWSQIA ARLPGRTDNE IKNFWNSTIK 120 KRLKNMSSTT TTTSTSPNAS ETSISEPSNK DLNNMGGFIS TLHNKHAGFV PMFGSSPSPS 180 MMQTSTVFNN MIERFPMLEQ GLINMPASGG YFEGTGSTPC FSQCEVHNNK GSCYLENEVF 240 ESVNIGVEGD MFVPPLENVT CKREETTNSS YFDDDINSIL NNCNNIGIAE NKAHHGVENL 300 FQQELATATG EWDFEELMKD VSSFPFLDFS Y*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT140096 | 1e-100 | BT140096.1 Lotus japonicus clone JCVI-FLLj-12H15 unknown mRNA. |