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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.13G327600.1.p |
Common Name | GLYMA_13G327600, LOC100817193 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
NAC |
Protein Properties |
Length: 350aa MW: 39939.6 Da PI: 7.361 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.13G327600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 165.8 | 1.5e-51 | 13 | 139 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
ppGfrFhP+deel+v+yL++k+++++l++ ++i+e+++yk++Pw+Lp+k +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+
Glyma.13G327600.1.p 13 PPGFRFHPSDEELIVHYLQNKISSRPLPA-SIIAEINLYKYNPWELPNKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKP 101
9****************************.89***************8777899************************************ PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ls+ +++ +g+kk Lvfy+gr pkg ktdW+m+eyrl
Glyma.13G327600.1.p 102 ILSScGSKRIGVKKALVFYSGRPPKGAKTDWIMNEYRL 139
***988889***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MEGDQQGSNY SFPPGFRFHP SDEELIVHYL QNKISSRPLP ASIIAEINLY KYNPWELPNK 60 SLFGEEEWYF FSPRDRKYPN GLRPNRAAAS GYWKATGTDK PILSSCGSKR IGVKKALVFY 120 SGRPPKGAKT DWIMNEYRLV DTITTSSRLK GSMRLDDWVL CRVRHKGYSP KNSCENQESP 180 NELNLSAKLP RSEEYPTNMN CRADMIPDYQ YKDYQIIASI LVGGPIPPTE SMPNLSFKGC 240 KGNNVVSVYE DDFTKVNSQA TIPSLESYFN PLTRKSSEDE QYGNLISFNR KFNTENRMDG 300 STSKVLTSRE LNCYNQNQSQ DDIFNVNPPD PSINFQELNE LDFSGRYHQ*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 1e-68 | 8 | 166 | 16 | 168 | NAC domain-containing protein 19 |
3swm_B | 1e-68 | 8 | 166 | 16 | 168 | NAC domain-containing protein 19 |
3swm_C | 1e-68 | 8 | 166 | 16 | 168 | NAC domain-containing protein 19 |
3swm_D | 1e-68 | 8 | 166 | 16 | 168 | NAC domain-containing protein 19 |
3swp_A | 1e-68 | 8 | 166 | 16 | 168 | NAC domain-containing protein 19 |
3swp_B | 1e-68 | 8 | 166 | 16 | 168 | NAC domain-containing protein 19 |
3swp_C | 1e-68 | 8 | 166 | 16 | 168 | NAC domain-containing protein 19 |
3swp_D | 1e-68 | 8 | 166 | 16 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor of the NAC family associated with male fertility. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |