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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.13G321800.1.p |
| Common Name | GLYMA_13G321800 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
C2H2 |
| Protein Properties |
Length: 279aa MW: 30936.5 Da PI: 9.0585 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.13G321800.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 11.4 | 0.001 | 200 | 223 | 1 | 23 |
EEETTTT.EEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23
y+C+ C+ k Fs s+L++H + +
Glyma.13G321800.1.p 200 YVCKRCNqKQFSVLSDLRTHEKHC 223
9*******************9876 PP
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| 2 | zf-C2H2 | 11.2 | 0.0011 | 231 | 246 | 5 | 20 |
TTTEEESSHHHHHHHH CS
zf-C2H2 5 dCgksFsrksnLkrHi 20
Cg+sFsrk+ L+ H
Glyma.13G321800.1.p 231 TCGTSFSRKDKLMGHV 246
6************997 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MISRATSSFP SVHHQGLQMF PDPEGFVSPS EESGSSGTTS HSSSLLFNLS ILKDKLSEVQ 60
TLVGVILSPN QSLPEPTSMA ISSMNSIIQE IIVTATSMMF TCQQMALTTP PGFERDANLR 120
MHMRAHGDEY KTNAALSNPI KNKGNLLEGG RECLMSTVKP KYSCPQEGCR WNQRHVKFQP 180
LKSMICAKNH YKRSHCPKMY VCKRCNQKQF SVLSDLRTHE KHCGDLKWQC TCGTSFSRKD 240
KLMGHVALFV GHQPAAAINN SNALSFSAKL EQQHTLQM*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed at low levels in roots (e.g. root tips and lateral roots), leaves (e.g. at the edge of mature leaves, possibly in hydathodes, and in vascular bundles), flowers (e.g. floral filaments), stems, siliques and cotyledons. {ECO:0000269|PubMed:23935008}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. Together with STOP1, plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation. {ECO:0000269|PubMed:23935008}. |
