PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G317000.1.p
Common NameGLYMA_13G317000, LOC100799576
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 337aa    MW: 37340.2 Da    PI: 9.4451
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G317000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.33e-12254304555
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                          +r+rr+ kNRe+A rsR+R++a++ eLe +   L++eN++Lk++l e + +
  Glyma.13G317000.1.p 254 RRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQTLAEAERK 304
                          69****************************************888776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-10250314IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.335252304IPR004827Basic-leucine zipper domain
PfamPF001701.9E-10254306IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.1E-12254307No hitNo description
SuperFamilySSF579591.25E-9254303No hitNo description
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MSLQQPNQEV PLQEPEATFS QLSKQNSILS LTLDEFYCKN GKSLGSMNMD EFLSSIWNSD  60
DNNQVNPPLP TLDEAAKGKS VIATEPTTIS QPGSLSVPPP ICKKTVDEVW SQIHKSQPDH  120
NDANNSLARN EPLLKRQQTL GEMTLEDFLV KAGVVQESSS LFKSSLLPQN QIGNIASNGP  180
LGAGYRLRPV IGTGSSVSCN GLETQNMLAQ NNNLVVKDLT TNGAVEKCPS LGESNGKGNR  240
KRIIDGPPEV VVERRQRRML KNRESAARSR ARRQAYTVEL EAELNLLKEE NEKLKQTLAE  300
AERKRKQEIS QRKHTTMAQK RTENLRAMRR PLSASW*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.596250.0seed coat
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G317000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2352340.0AC235234.1 Glycine max strain Williams 82 clone GM_WBb0028B23, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003541970.20.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLK7M3090.0K7M309_SOYBN; Uncharacterized protein
STRINGGLYMA13G39340.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20923374
Representative plantOGRP1377423
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.15e-52bZIP family protein