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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.13G314600.2.p |
| Common Name | GLYMA_13G314600 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
NAC |
| Protein Properties |
Length: 324aa MW: 36519.8 Da PI: 9.2101 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.13G314600.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 93.5 | 3.4e-29 | 20 | 96 | 51 | 128 |
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++++++ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s +++ +g+k+tLvf+ grapkge+t+W+mhey +
Glyma.13G314600.2.p 20 IYQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKS-GSNIIGTKRTLVFHLGRAPKGERTEWIMHEYCI 96
556899**************************************.99*****************************86 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009845 | Biological Process | seed germination |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0033619 | Biological Process | membrane protein proteolysis |
| GO:0048573 | Biological Process | photoperiodism, flowering |
| GO:0071472 | Biological Process | cellular response to salt stress |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005886 | Cellular Component | plasma membrane |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MRRVFKSFLR LSFVNTSLGI YQSDNEWFFF SPRGRKYPNG SQSKRATECG YWKATGKERN 60
VKSGSNIIGT KRTLVFHLGR APKGERTEWI MHEYCINDKS QESLVICRLK RNTEFRLSDA 120
SNRASSSQRH PVNSHESGCA ISGGGIDQRD ACEQDKEVGC SSKRDSSSYG SPSMEQIDSV 180
SESNQRPVNE ATFTESSGQP KEGYEEDCYA EILKDDIIKL DESSVLVESH TRPQDPTQMQ 240
PAPQGTAQRR IRLRVGNSKH SRAVVRFPST MHSSKNTFFA RTTNSLVVLA FFVFTLMVLY 300
FLSLVRGQKQ DKYCGEFSGV NHD*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-24 | 24 | 111 | 70 | 164 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-24 | 24 | 111 | 70 | 164 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-24 | 24 | 111 | 70 | 164 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-24 | 24 | 111 | 70 | 164 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-24 | 24 | 111 | 73 | 167 | NAC domain-containing protein 19 |
| 3swm_B | 1e-24 | 24 | 111 | 73 | 167 | NAC domain-containing protein 19 |
| 3swm_C | 1e-24 | 24 | 111 | 73 | 167 | NAC domain-containing protein 19 |
| 3swm_D | 1e-24 | 24 | 111 | 73 | 167 | NAC domain-containing protein 19 |
| 3swp_A | 1e-24 | 24 | 111 | 73 | 167 | NAC domain-containing protein 19 |
| 3swp_B | 1e-24 | 24 | 111 | 73 | 167 | NAC domain-containing protein 19 |
| 3swp_C | 1e-24 | 24 | 111 | 73 | 167 | NAC domain-containing protein 19 |
| 3swp_D | 1e-24 | 24 | 111 | 73 | 167 | NAC domain-containing protein 19 |
| 4dul_A | 1e-24 | 24 | 111 | 70 | 164 | NAC domain-containing protein 19 |
| 4dul_B | 1e-24 | 24 | 111 | 70 | 164 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 9e-93 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
