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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.13G304900.1.p |
| Common Name | GLYMA_13G304900, LOC100802093 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 468aa MW: 52211.8 Da PI: 6.387 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.13G304900.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 288.6 | 1.8e-88 | 55 | 449 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsP 89
++lLl+cA a++s+d +laq++++ l++ asp gd++qRl++ f++AL +r +r +++ ++ +++ + + +++++l ++++ P
Glyma.13G304900.1.p 55 EKLLLHCASALESNDITLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRICPTAMSFKGSNTI----QRRLMSVTELagYVDLIP 140
689***************************************************77766643322222....333334444466****** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpf 176
+++f++ + N+ I++a+ g +rvHi+Df+i++++QWp++++ La+RpegppslRiT+ + ++ + +++e+g rL +fA+ +vpf
Glyma.13G304900.1.p 141 WHRFGYCASNNEIYKAITGFQRVHIVDFSITHCMQWPTFIDGLAKRPEGPPSLRITVPSCRPHVpplVNISIHEVGLRLGNFAKFRDVPF 230
********************************************************9888555588999********************* PP
GRAS 177 efnvl....................vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles....erdevLklvkslsPkvvvvv 242
efnv+ + l+ l++ +L+++++Eal++n++ l +l d++ ++ rd++L+l+k+l+P++v +v
Glyma.13G304900.1.p 231 EFNVIgntegpltpaelsdestsfhFEAMLSLLNPTMLNLREDEALVINCQNWLRYLSDDRKGISCqsfsLRDAFLNLIKGLNPRIVLLV 320
*****************9999998556689999*************************9987665444669******************* PP
GRAS 243 eqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332
++++d++++s+ r++ ++++ + fd+le+ lp++s +r+ E +g++i+n++ eg +r+er e+ + ++r++++G+ +vp+ ++
Glyma.13G304900.1.p 321 DEDCDLSASSLTSRITTCFNHLWIPFDALETFLPKDSCQRSEFESD-IGQKIENIIGYEGHQRIERLESGVQMSQRMKNVGYLSVPFCDE 409
**********************************************.******************************************* PP
GRAS 333 aakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
++ ++k ll +++ g+ ++ e+g lvl+Wk+++ v+++aW
Glyma.13G304900.1.p 410 TVREVKGLLDEHA-SGWGMKREEGMLVLTWKGNSCVFATAW 449
*************.8899*********************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MQVTSSQSHM KAELKGTTSI SFQNPNTALF NTPHNNPLSG ALKGCLGSLD GACIEKLLLH 60
CASALESNDI TLAQQVMWVL NNVASPVGDT NQRLTSWFLR ALISRASRIC PTAMSFKGSN 120
TIQRRLMSVT ELAGYVDLIP WHRFGYCASN NEIYKAITGF QRVHIVDFSI THCMQWPTFI 180
DGLAKRPEGP PSLRITVPSC RPHVPPLVNI SIHEVGLRLG NFAKFRDVPF EFNVIGNTEG 240
PLTPAELSDE STSFHFEAML SLLNPTMLNL REDEALVINC QNWLRYLSDD RKGISCQSFS 300
LRDAFLNLIK GLNPRIVLLV DEDCDLSASS LTSRITTCFN HLWIPFDALE TFLPKDSCQR 360
SEFESDIGQK IENIIGYEGH QRIERLESGV QMSQRMKNVG YLSVPFCDET VREVKGLLDE 420
HASGWGMKRE EGMLVLTWKG NSCVFATAWV PCEILRDHHI GMDASLS*
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| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
