PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.13G292800.2.p | ||||||||
Common Name | GLYMA_13G292800 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 222aa MW: 25534.2 Da PI: 5.8491 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.1 | 5.1e-10 | 182 | 216 | 5 | 39 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 kr +r NR +A+rsR RK+++i eLe+ v +L+ Glyma.13G292800.2.p 182 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQ 216 899***************************99885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 8.519 | 180 | 216 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.3E-10 | 182 | 216 | No hit | No description |
SuperFamily | SSF57959 | 1.69E-8 | 182 | 216 | No hit | No description |
Pfam | PF00170 | 1.6E-8 | 182 | 216 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.45E-18 | 183 | 216 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 185 | 200 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MTQLPPKIPN MSPSWPDFSS HHQKMQLPPL KSGSNNNYQH NQNPSWVDEF LDFSSARRGA 60 HRRSVSDSIT YLDSPMKCGE NNNNNENEFD KFDDEQFMSM FTDEVVLSGV PLLPPTILSS 120 SNPSSPSDQN FFNDEKEKKE EHHHHQLKNE ADEVESQCKQ EIMQLPNDTN TCSSNERITD 180 PKRVKRILAN RQSAQRSRVR KLQYISELER SVTSLQVWDV T* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.28648 | 0.0 | leaf| root |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.13G292800.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT096900 | 0.0 | BT096900.1 Soybean clone JCVI-FLGm-25J24 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003543312.1 | 1e-160 | basic leucine zipper 61 isoform X1 | ||||
Refseq | XP_025980674.1 | 1e-160 | basic leucine zipper 34 isoform X2 | ||||
Swissprot | Q9M2K4 | 9e-63 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | I1M3N7 | 1e-163 | I1M3N7_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA13G36870.2 | 1e-159 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 2e-56 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.13G292800.2.p |
Publications ? help Back to Top | |||
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