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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.13G282100.1.p |
Common Name | GLYMA_13G282100, LOC100820398 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 381aa MW: 42432.6 Da PI: 8.7546 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.13G282100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 60.6 | 3.3e-19 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+d+++++G g W+t ++ g++R++k+c++rw +yl
Glyma.13G282100.1.p 13 KGPWTPEEDQKLIDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYL 60
79********************************************97 PP
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2 | Myb_DNA-binding | 53.9 | 4.1e-17 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rgr++ eE+e +++++ lG++ W+tIa+ ++ gRt++++k++w+++
Glyma.13G282100.1.p 66 RGRFSFEEEEAIIQLHSVLGNK-WSTIAANLP-GRTDNEIKNYWNTH 110
89********************.*********.************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 381 aa
Download sequence Send
to blast |
MAKSSTEKNG LKKGPWTPEE DQKLIDYIQK HGHGKWRTLP KNAGLKRCGK SCRLRWANYL 60 RPDIKRGRFS FEEEEAIIQL HSVLGNKWST IAANLPGRTD NEIKNYWNTH IKKKLLKMGI 120 DPVTHTPRLD VIQLASILNT SLYNSAPQFN YPSLSGIGRS VINPSHMLGL LTTLLSCQNR 180 NYNPDVLNNN QLSGGSTLLQ NQHQCSRMQL DSTQAFQPNQ PQVSLQENHI AKSNSNPLNM 240 EPQVMKTTLE NQITPIATPF SQQNTLPNLW HYNTEGHISD LPTMAQSSSA MQCFSSPKFN 300 SIYNNLLENQ NLCNNNEGMP NFNLSSLLSS TPSSSSPIST LNSSSSTTFV NGTTEDERDT 360 YGSSMLMYNI SNGLNDSGLL *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031201 | 0.0 | KT031201.1 Glycine max clone HN_CCL_73 MYB/HD-like transcription factor (Glyma12g34650.2) mRNA, partial cds. |