PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G266500.1.p
Common NameGLYMA_13G266500, LOC100795369
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family BES1
Protein Properties Length: 326aa    MW: 35132.1 Da    PI: 8.3674
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G266500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822212.69.5e-6621451150
               DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasasp 90 
                          ++++r pt kErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc+eAGw+ve+DGttyrkg+kple+++++g s+ asp
  Glyma.13G266500.1.p   2 TSGTRLPTSKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSSAASP 91 
                          5899************************************************************************************** PP

               DUF822  91 esslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                          +ss++        +sp++sy++sp sssfpspss+  +++ +a  +sl+p+l++ls++sss+
  Glyma.13G266500.1.p  92 CSSYH--------PSPCASYNPSPGSSSFPSPSSSPYTQIPNAdgNSLIPWLKNLSTASSSA 145
                          *****........*******************9998888776677**********9988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.3E-644139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MTSGTRLPTS KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPLERM DIVGGSSAAS PCSSYHPSPC ASYNPSPGSS SFPSPSSSPY  120
TQIPNADGNS LIPWLKNLST ASSSASSPKL PHLYLHSGSI SAPVTPPLSS PTSRTPRINV  180
EWDEQSARPG WTRQQHYSFL PSSSPPSPGR QVVDPEWFAG IKLPHVSPTS PTFSLVSSNP  240
FAFKEDGLPG SGSRMWTPAQ SGTCSPAIPP GSDQNADIPM SEAVSDEFAF GSNTLGLVKP  300
WEGERIHEEF GSDDLELTLG NSKTR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-222577391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-222577391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-222577391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-222577391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.275390.0flower| hypocotyl| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G266500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003543195.10.0BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-139BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLI1M2X70.0I1M2X7_SOYBN; Uncharacterized protein
STRINGGLYMA13G34170.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Representative plantOGRP15951542
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-113BES1/BZR1 homolog 4