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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.13G216900.1.p |
| Common Name | GLYMA_13G216900, LOC102664746 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
ERF |
| Protein Properties |
Length: 323aa MW: 35741.2 Da PI: 6.4299 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.13G216900.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 52.1 | 1.7e-16 | 48 | 96 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +gr++AeIr p + + r++lg+f+ta+eAa a+++a+++++g
Glyma.13G216900.1.p 48 FLGVRRRP-WGRYAAEIRNPLT---KERHWLGTFDTAQEAALAYDRAALSMKG 96
56******.**********743...4************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MSTSRTSDAS LKGYESNQTQ MNLSLLQRNM SPSGERRGRG KQAEPGRFLG VRRRPWGRYA 60
AEIRNPLTKE RHWLGTFDTA QEAALAYDRA ALSMKGCQAR TNFIYSKDTN TNIFHNALTP 120
MNTQPLLPPS HNTHNTQPTN QSGLSHHLGA ISSHIENPSD MSAYGSPQDD NFFFSNDSNS 180
GYLECIVQDN CFRKSNASAS SHDLTIGHVN SNSMHVQPHF DTTQEALNMQ TTVTSNYADI 240
SYPSQGLWNN QQSWDCSSNE LAAMFKNPSR AEEGYMCMNA LMYPFTDSSS YGFMTQAEAV 300
SSTTFSPSLP PFGDADLGYS PF*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed in the early stages of lateral root primordia formation (PubMed:17630277). Expressed in early floral meristem (stage 1 to 2) (PubMed:19482972). {ECO:0000269|PubMed:17630277, ECO:0000269|PubMed:19482972}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the control of cell division patterns during the early lateral root primordium development. Acts downstream of auxin signaling (PubMed:17630277). Regulated by ARF7 and ARF19 in response to auxin. Co-acts with LBD16 and LBD18 to control lateral root development (PubMed:23749813). Involved in the determination of floral meristem identity and suppression of bract growth. Required for proper conversion of secondary inflorescences to flowers. Acts together with NPR5/BOP2 and NPR6/BOP1 to promote expression of LFY and AP1, two central regulators of floral meristem identity (PubMed:19482972). {ECO:0000250|UniProtKB:Q9LND1, ECO:0000269|PubMed:17630277, ECO:0000269|PubMed:19482972, ECO:0000269|PubMed:23749813}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By auxin. {ECO:0000269|PubMed:17630277, ECO:0000269|PubMed:23749813}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015038 | 1e-141 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |
