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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.13G152300.1.p |
| Common Name | Glyma11g33180.1, GLYMA_13G152300, MYB173 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
MYB_related |
| Protein Properties |
Length: 288aa MW: 31820.5 Da PI: 7.6409 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.13G152300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 59 | 103 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r rWT eE++++++a k++G W++I +++g ++t+ q++s+ qk+
Glyma.13G152300.1.p 59 RERWTDEEHKKFLEALKLYGRA-WRRIEEHVG-TKTAVQIRSHAQKF 103
78******************88.*********.************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MAIQDQNGFF RSQGGPPEGG GVSLSSGHSV THIQLNDQFS CGNDYALKVR KPYTITKQRE 60
RWTDEEHKKF LEALKLYGRA WRRIEEHVGT KTAVQIRSHA QKFFSKVLHD PTGNNTNTVE 120
SIEIPPPRPK RKPMHPYPRK LVETPNKEIS IPEQPMKSNS LKSSDFDQEN QSPKSVLSGV 180
GSDSLGSSDS DTPNGSLSPM SSISGFHTSS FTRAKPKTTT SEEEAGMDTD STHDEKPLMK 240
FKLPPNGCVS IKEDNTAEES SGRTFKLFGM TLFVTDTCKP SPTIEEC*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Morning-phased transcription factor integrating the circadian clock and auxin pathways. Binds to the evening element (EE) of promoters. Does not act within the central clock, but regulates free auxin levels in a time-of-day specific manner. Positively regulates the expression of YUC8 during the day, but has no effect during the night. Negative regulator of freezing tolerance. {ECO:0000269|PubMed:19805390, ECO:0000269|PubMed:23240770}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Circadian-regulation. Peak of transcript abundance near subjective dawn. Down-regulated and strongly decreased amplitude of circadian oscillation upon cold treatment. {ECO:0000269|PubMed:19805390, ECO:0000269|PubMed:23240770}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT031199 | 0.0 | KT031199.1 Glycine max clone HN_CCL_153 MYB/HD-like transcription factor (Glyma11g33180.1) mRNA, partial cds. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Xu G, et al.
REVEILLE1 promotes NADPH: protochlorophyllide oxidoreductase A expression and seedling greening in Arabidopsis.
Photosyn. Res., 2015. 126(2-3): p. 331-40
[PMID:25910753] - Chai C, et al.
Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance.
BMC Genomics, 2015. 16: p. 596
[PMID:26268547] - Jiang Z,Xu G,Jing Y,Tang W,Lin R
Phytochrome B and REVEILLE1/2-mediated signalling controls seed dormancy and germination in Arabidopsis.
Nat Commun, 2016. 7: p. 12377
[PMID:27506149]
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