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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.13G100500.1.p |
Common Name | GLYMA_13G100500, LOC100815437 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
HB-PHD |
Protein Properties |
Length: 700aa MW: 79482.1 Da PI: 9.9835 |
Description |
HB-PHD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.13G100500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 33.3 | 8.1e-11 | 486 | 530 | 9 | 53 |
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53
++ +e+L ++F++n p ++ re L+k+lgL++++V+ WF+N R+
Glyma.13G100500.1.p 486 RDAVERLRQVFAENELPPRSIREGLSKELGLDTEKVSKWFKNARY 530
67899**************************************97 PP
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2 | PHD | 34.9 | 3.6e-12 | 225 | 279 | 2 | 51 |
BTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
PHD 2 CkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51
C C+ + +++++lC+ +C+++fH+kCl+++l++e++ g w+C+ C++k
Glyma.13G100500.1.p 225 CVKCKVheELPDNDIILCNgKCERAFHQKCLDPPLDTENISPGeqGWFCKFCECK 279
88888843445*******956******************999899*******985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 700 aa
Download sequence Send
to blast |
MRDSEKKLNN KGSKKSSPLK VRKKGQGKKE KVKVGSKSHT KNAGTDISRK RVISSLKVKG 60 PRKDSSDKKL ITGKKLPMKN KKSSQKSSSK LQGKKASLSS RKEGGDADGA VKLQKMKRKR 120 KKKRPRNNVD LDDPSRLQRR TRYLLIKMKL EQNLIDAYSG EGWKGQSREK IRPEKELQRA 180 RKQILKCRLG IRDAIRQLDS LGSLSSIEDS AIALDGSVCH EHILCVKCKV HEELPDNDII 240 LCNGKCERAF HQKCLDPPLD TENISPGEQG WFCKFCECKM EILEATNAHL GTHFSLHSTW 300 QDVFKEEAAI PDGEIALLNP EQEWPSDDSE DDDYDPERKE DSHNINIEGT NDSASEDLSS 360 STSLCSSDGE CSPIDGVSHE YFSVNSSIDS DESEDKACGR RQRKAVDYKK LYDEMFGKDA 420 PAYELLSEDE DWGPGKRKRR EKESDAVDSL MTLHESENRH PNNEHNMTSK DSSSIKIKRH 480 CFRIPRDAVE RLRQVFAENE LPPRSIREGL SKELGLDTEK VSKWFKNARY LALKNRKHQA 540 EGVADQLQSI TSTKNRLQKQ ENVDPLKSKT PKITRTHSQK DVKNVNGRKK MKSSNKKRQP 600 EIPPPPGENG KKDFMEISDD VSLKKLLKKR KKRLINFTFG GDSQLAELEF ERLSELKTKV 660 DSMKQKLTAI QNYRVKGSPY SNEPSIVYVP TAVLREKVE*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 115 | 122 | MKRKRKKK |
2 | 117 | 123 | RKRKKKR |
3 | 436 | 441 | RKRREK |
4 | 622 | 630 | LKKLLKKRK |
5 | 624 | 630 | KLLKKRK |
6 | 626 | 633 | LKKRKKRL |
7 | 627 | 631 | KKRKK |
Functional Description ? help
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Source |
Description |
UniProt | Specifically binds to the fungal elicitor-responsive DNA element, 5'-CTAATTGTTTA-3', of the gene PR2 promoter. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By pathogen infection. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-172 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |