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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.13G081600.1.p |
Common Name | GLYMA_13G081600 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 265aa MW: 28678.8 Da PI: 5.0421 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.13G081600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.8 | 2.8e-18 | 41 | 91 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g
Glyma.13G081600.1.p 41 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 91
59*****998.**********9...336************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MVKSENKIQR EQPSSSKLMR PLSSSSSSSS SSSDNNNKNK KKYKGVRMRS WGSWVSEIRA 60 PNQKTRIWLG SYSTAEAAAR AYDAALLCLK GSSATNLNFP SSSSSLQHYI IPQDTSMMSP 120 KSIQRVAAAA ANNFLDNNAI AINNNVTTPP SPISPHSPPL ASTPSSSSFV SSPSMSSSSP 180 SDQIDDDVSL LTPFGAYTTA VATTTICDQE NESMAMMESW YGLEGLQSPK YVDQMLSGAF 240 FDIDSTQLLD DLYEESDIRL WSFC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ228455 | 0.0 | FJ228455.1 Glycine max AP2 domain-containing transcription factor 3 (AP2-3) mRNA, complete cds. |