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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.12G199100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 252aa MW: 29091.4 Da PI: 5.3855 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.12G199100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 51.9 | 1.7e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEd++l+ +++++G +W++ ++ g+ R++k+c++rw++yl
Glyma.12G199100.1.p 14 KGTWTPEEDKKLIAYITRYGHWNWNLLPKFAGLERCGKSCRLRWLNYL 61
799*****************99************************97 PP
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2 | Myb_DNA-binding | 57.5 | 3.1e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+ T+eEde +++ v++lG++ W++Ia+ ++ gRt++++k++w++
Glyma.12G199100.1.p 67 RGNYTQEEDETIIKMVQRLGNR-WSLIAAQLP-GRTDNEIKNYWHTN 111
899*******************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MVKNTYSDKS GHRKGTWTPE EDKKLIAYIT RYGHWNWNLL PKFAGLERCG KSCRLRWLNY 60 LRPNIKRGNY TQEEDETIIK MVQRLGNRWS LIAAQLPGRT DNEIKNYWHT NLKKKYHQQN 120 VNAETEVSKS KDHQSPDEAL PKPNNVDDVP FQNLPPTSQS TDSCTTSSII ISPTQFSITT 180 TGRSSDDSKE KFDIPYEDEF AFADVMNESF WLEPYVVDIS CYPSDVLVAE PDCFSPVPDV 240 ELWSHDHEYF A*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 4e-42 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |