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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.12G158200.1.p |
| Common Name | GLYMA_12G158200 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
FAR1 |
| Protein Properties |
Length: 295aa MW: 34746.8 Da PI: 4.9797 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.12G158200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 31.1 | 7.9e-10 | 102 | 157 | 2 | 59 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetr 59
fY+ YAk +GFs+rks+ ++ + +e+ ++tf Cs+ g+r+++ +++ ++r++r++++
Glyma.12G158200.1.p 102 FYCWYAKITGFSIRKSHIVRN-TCRETLQQTFFCSCAGYRRHKGSTS-NRRKRREKKK 157
9****************9999.66779***************99982.2222222222 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MESSDNFCRF VNGDGDNDVT EVYENDHADE DDVRLEDEEE VDSEVHNDDY GDYDDFWIPD 60
LFKEECISID TVVDIREFDM EKITVEDVSR LDFAELELAY LFYCWYAKIT GFSIRKSHIV 120
RNTCRETLQQ TFFCSCAGYR RHKGSTSNRR KRREKKKESR KMSATDIMQI ENYRKVGIRP 180
LHMYAAFANH CGGYDKVGFI RKDIYNQEVH MRKQHTSDAS GALKYLHDLR KKDPIMYVSY 240
TMDEGSRLQR LLWCDIESQL LYEAFDDVLA FDATYKKNKY LCPFVVFSGV NHYN*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 149 | 154 | RKRREK |
| 2 | 149 | 157 | RKRREKKKE |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC235139 | 1e-146 | AC235139.1 Glycine max strain Williams 82 clone GM_WBa0065P04, complete sequence. |
