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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.12G072000.1.p |
Common Name | GLYMA_12G072000 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
LBD |
Protein Properties |
Length: 203aa MW: 22029.1 Da PI: 5.6692 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.12G072000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 136.9 | 7.2e-43 | 35 | 134 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
+CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da++s+vyeA ar+rdPvyG++g i +lq+q+++l
Glyma.12G072000.1.p 35 PCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQINEL 124
7***************************************************************************************** PP
DUF260 91 kaelallkee 100
+a+la++++e
Glyma.12G072000.1.p 125 QAQLAKAQAE 134
******9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MENSDISSAP LSHSPTNSSS SSPTPPSPPT VVMSPCAACK ILRRRCAEKC VLAPYFPPTE 60 PAKFTIAHRV FGASNIIKFL QELPESQRAD AVTSMVYEAS ARIRDPVYGC AGAICQLQKQ 120 INELQAQLAK AQAELVNMQI QQANLVALIC MKMAQSPQES PQQLVDDFIS TPPHSGGAYQ 180 SGMNFFEDNT SLNSLWEQPL WT*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |