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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.12G062300.2.p |
Common Name | GLYMA_12G062300, LOC100816121 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB_related |
Protein Properties |
Length: 625aa MW: 69055.5 Da PI: 8.0139 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.12G062300.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 25.9 | 2.2e-08 | 523 | 572 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
r +++ +E e lv+av++lG+g+W+ + + k+Rt ++k++w ++
Glyma.12G062300.2.p 523 RRPFSVDEVEALVQAVEKLGTGRWRDVKVCAFdnaKHRTYVDLKDKWKTL 572
6799**************************999**************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 625 aa
Download sequence Send
to blast |
MSSDTSSEKD QSGFVKECQD ANKPSKSVIS DEGSCDKSGF SRLSSQTNNK NCGLKEFPHL 60 AIDGDAGTAS IVTSSTCLEG FIAEKLVDGN SHFKVENVTS TVNLDSSDYP KHSNFKLHGD 120 TSKGKDELHK FEKVPIGSGI DMCSFEDPLD DNPPALISLG GNAKLSGYND RIPCSLLSKS 180 RDNVPVVSRD DDENSYGCTH PINTKTKSFR LKTGIGDNRI SKRLASNFQK VAEKTKDHTH 240 SNNDGDWKRT YCSKRNCNKH QSSQMNIPFK KRKLFNYRSV SNSNGLIRSG GIYYSPENCM 300 NQDGCGSPPG MHKDPGMPSL EACQHQTLRS RGSHVNLRIK SFRVPELFIE VPETATIGSL 360 KRTVMDAVTA VLGGELHIGV FLQGKKVKDD SKTLLQTGIS HQNELDALGF TLEPNSSQSL 420 PIVCAAHSPG PKADITQPVI SPAVIHQRIQ GNSDMLPEHQ VTSLGSHFEN DHDSAPSPVN 480 ASVEKGMKDS KELVTVPEMD EELAMVPVHQ KSKRSEIVQR RIRRPFSVDE VEALVQAVEK 540 LGTGRWRDVK VCAFDNAKHR TYVDLKDKWK TLVHTARISP QQRRGEPVPQ ELLDRVLVAH 600 AYWSHQQTKP QHKHHPETET VFSF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed ubiquitously. {ECO:0000269|PubMed:15364931}. |
Functional Description ? help
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Source |
Description |
UniProt | Binds specifically to the plant telomeric double-stranded DNA sequences. At least 6 repeats of telomeric sequences are required for binding. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015039 | 1e-142 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |