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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.12G062100.1.p |
Common Name | GLYMA_12G062100, LOC100813989 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GRAS |
Protein Properties |
Length: 677aa MW: 76754.4 Da PI: 5.8059 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.12G062100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 363.2 | 3.8e-111 | 299 | 673 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
l++lLl c +av ++d ++a++lL+++++++sp gd+ qRla+yf+++L+arl++ ++++ + ++++++ se l+a+++fs sP+
Glyma.12G062100.1.p 299 LRNLLLMCSQAVYASDIRAANELLKQIRQHSSPIGDASQRLAHYFANGLEARLVGDGTSTQGMYTFLSSKNNTFSELLKAYQVFSSSSPF 388
689****************************************************888888888888888888***************** PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
kf++l N +I++a++++e+vHiiDf+i +G+QWp L++ L++R++gpp+lRiTg++ p++g +e++eetg+ La+++++ +vpfe+
Glyma.12G062100.1.p 389 KKFAYLFENTMIMKAAASAETVHIIDFGILHGFQWPMLIRLLSNREGGPPKLRITGIEFPQPGfrPTEKIEETGRHLANYCKRYNVPFEY 478
**************************************************************9*************************** PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrllde.svsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
n++ ++++e+++le+L++ ++E +aV ++ + ++llde + +++s+r++vL+l+++++P++++++ + ++n++ F +rf eal +ysa+
Glyma.12G062100.1.p 479 NAISSRNWETIQLEALKIASNELVAVYCHQRFENLLDEcTIEVNSPRNAVLHLIRKINPDIFTHSITNGSYNAPFFTTRFREALFHYSAI 568
**9999******************************984567777********************************************* PP
GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
d ++ ++re+e r +vErel grei+nv+aceg++r+er et+++W+ r ++aGFk++pl+e+ +++ ++ l++++ d + ++e++++
Glyma.12G062100.1.p 569 SDKNDTVISRENERRLMVERELYGREIMNVIACEGSDRIERPETYKRWQVRNMKAGFKQLPLNEELMAKFRSKLKEYHRD-FVLDENNNW 657
******************************************************************************66.********* PP
GRAS 358 lvlgWkdrpLvsvSaW 373
+++gWk+r L++ S+W
Glyma.12G062100.1.p 658 MLQGWKGRILFASSCW 673
**************** PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 677 aa
Download sequence Send
to blast |
MESNFPGAYH LFGEDQGIPY LSDSLGFPTM DPSSPEDNDF SETVKFISQI LMEENVDQRP 60 FYDSLTLRVT EKSFYDALTG NQPPFVLCSE AETNTITSNN SGSNFLNENS RELNIPSPLS 120 VSVSAIHFNP NPLSQPLPSV TVSDRVSVLD SSIAKLLAQN ISIEVDSVSK FRRGLEEATK 180 FLPPEPKLVT GLDLYREQAI NSSGDTSYRL NSRKNHGCEV RDTREEEEEE GGRSNKQSAL 240 SLVDETDLSD AFDQVLLHEE NLWNEHTCLQ SEAEKVEGPN GGKGGSDKKV RKKKKTVDLR 300 NLLLMCSQAV YASDIRAANE LLKQIRQHSS PIGDASQRLA HYFANGLEAR LVGDGTSTQG 360 MYTFLSSKNN TFSELLKAYQ VFSSSSPFKK FAYLFENTMI MKAAASAETV HIIDFGILHG 420 FQWPMLIRLL SNREGGPPKL RITGIEFPQP GFRPTEKIEE TGRHLANYCK RYNVPFEYNA 480 ISSRNWETIQ LEALKIASNE LVAVYCHQRF ENLLDECTIE VNSPRNAVLH LIRKINPDIF 540 THSITNGSYN APFFTTRFRE ALFHYSAISD KNDTVISREN ERRLMVEREL YGREIMNVIA 600 CEGSDRIERP ETYKRWQVRN MKAGFKQLPL NEELMAKFRS KLKEYHRDFV LDENNNWMLQ 660 GWKGRILFAS SCWVPA*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |