PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.11G246400.1.p
Common NameGLYMA_11G246400, LOC100797421
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ARR-B
Protein Properties Length: 605aa    MW: 68074.7 Da    PI: 5.4658
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.11G246400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like23.89.6e-08199220122
              G2-like   1 kprlrWtpeLHerFveaveqLG 22 
                          k+r++W+ +LH++Fv+av+q+G
  Glyma.11G246400.1.p 199 KARVVWSVDLHQKFVKAVNQIG 220
                          68******************96 PP
2G2-like38.13.5e-122442712855
              G2-like  28 tPktilelmkvkgLtlehvkSHLQkYRl 55 
                           Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Glyma.11G246400.1.p 244 GPKKILDLMNVPWLTRENVASHLQKYRL 271
                          5**************************8 PP
3Response_reg81.23.4e-27191271109
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                          vl+vdD+p+ +++l+++l+k +y ev+++  ++ al ll+e++  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge + + +
  Glyma.11G246400.1.p  19 VLVVDDDPTWLKILEKMLKKCNY-EVTTCCLARHALSLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMK 106
                          89*********************.***************999999**********************6644.8***************** PP

                          HHHTTESEEEESS--HHHHHH CS
         Response_reg  89 alkaGakdflsKpfdpeelvk 109
                           ++ Ga d+l Kp+ ++el++
  Glyma.11G246400.1.p 107 GVQHGACDYLLKPIRMKELRN 127
                          ******************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521727.54E-3616147IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.7E-4416159No hitNo description
SMARTSM004481.6E-3117129IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011042.67318133IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.2E-2419128IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.48E-2920133No hitNo description
SuperFamilySSF466892.87E-13197275IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.6E-25197276IPR009057Homeodomain-like
PfamPF002491.3E-5201270IPR001005SANT/Myb domain
TIGRFAMsTIGR015572.1E-10242271IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    Send to blast
MDNGCFSSPR RDFPAGLRVL VVDDDPTWLK ILEKMLKKCN YEVTTCCLAR HALSLLRERK  60
DGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVLRKRIHEA KEFESFESFE SIHLMRNGSE LSDDGNLFAV EDVTSTKKRK  180
DADNKHDDKE CLDPSSTKKA RVVWSVDLHQ KFVKAVNQIG FDNILYLSRT QKIVTNHICL  240
AEVGPKKILD LMNVPWLTRE NVASHLQKYR LYLSRIQKEN DQRSSSSGLK HSDFPLKDMR  300
SFGFQNSVNN QQQNDVAIDS YNHSDGSLQL QNVETKSHEA DPKGIVSQST IAKKGRILTG  360
NIADTNMRES LRVGLNQTFA PLESEENHAV FDCSMPTPYT WTEVPHMQLK EEHKSIVHLE  420
DSFNQLPLHG KQQQHIQVDQ SQSVASISSA PLITEEEVAA CKEPKPLFAD YKNDYANSVS  480
SIGNAVGTFP IQPGSLIMNG QSSEPISTTN SGLKTQGYNN LSSISDLEIY QSNLLLGGEV  540
ASAPSLDEDL HFYWLQGECY NNMNFSLQNI GMSEYYDPGL ISEAPTHLYD SADYSVIDQG  600
LFIA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.11G246400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006591475.10.0two-component response regulator ARR11 isoform X1
RefseqXP_028196158.10.0two-component response regulator ARR11-like isoform X1
TrEMBLA0A445HIB90.0A0A445HIB9_GLYSO; Two-component response regulator ORR26 isoform A
TrEMBLK7LS210.0K7LS21_SOYBN; Uncharacterized protein
STRINGGLYMA11G37480.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39993360
Representative plantOGRP29217120
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-119response regulator 11