 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.11G138000.1.p |
Common Name | GLYMA_11G138000, LOC100793210 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
GRAS |
Protein Properties |
Length: 681aa MW: 76497.8 Da PI: 6.0966 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.11G138000.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 376.3 | 3.8e-115 | 312 | 678 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
+lL++cA+av+s d++ a+++L+++++++sp+gd +qRla+yf+ +L++rla ++ k ++ +++s ++ l+a++++ +sP+l+
Glyma.11G138000.1.p 312 TLLTQCAQAVASFDQRTANETLKQIRQHSSPYGDGLQRLAHYFADGLEKRLAA---GTPKFISFQSAS---AADMLKAYRVYISASPFLR 395
69**************************************************9...555556666666...899**************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
+s+++aN++Il+ +++e+ +HiiDf+is+G+QWp+L+q L++Rp+gpp+lR+ g++ p++g +e++eetg+ L+k+++++gvpfe+n
Glyma.11G138000.1.p 396 MSNFLANSTILKLAQNESSIHIIDFGISYGFQWPCLIQRLSERPGGPPKLRMMGIDLPQPGfrPAERVEETGRWLEKYCKRFGVPFEYNC 485
************************************************************9***************************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
+a+++e+++le+L++++ E+++Vn+ ++l++l de+v+ + +rd++L+l+++++P+++ + + +n++ F++rf eal ++s+lfd+
Glyma.11G138000.1.p 486 -LAQKWETIRLEDLKIDRSEVTVVNCLYRLKNLSDETVTANCPRDALLRLIRRINPNIFMHGIVNGTYNAPFFVTRFREALFHFSSLFDM 574
.6**************************************************************************************** PP
GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
+ea++pre+ r ++E+ l+gr++ nv+acegaer+er et+++W+ r ++aGFk++pl ++ ++ +k +++k + + + v e+ +++++
Glyma.11G138000.1.p 575 FEANVPREDPSRLMIEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRAGFKQLPLAQEHVNRVKEMVKKEYHKDFVVGEDGKWVLQ 664
***************************************************************************888************ PP
GRAS 361 gWkdrpLvsvSaWr 374
gWk+r L++vS+W+
Glyma.11G138000.1.p 665 GWKGRILFAVSSWT 678
*************6 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 681 aa
Download sequence Send
to blast |
MLSTDSLLEN FPFVNGPISV FSNQNPESGF KVDDSCSPSE SVTDSGPSSG TSSNGEHAES 60 TKHSNPILRY ISDILMDEEV DLERKPCMLQ DCLRLQAAEK SFYDALVRSY PSSTGQFNDN 120 PDPDDNFGGT TSSESFSSYT TDNSCESDWF NGASDLDSSF LQRSLIDSLE HTYVAPDLFR 180 ETQAGVHFSN GAWNLIHLQN KPRAIEDGVM RGSVTATGLR EKRSYQMNDI SHEEEEKSNK 240 LSAVYLDDSE PSSMFDDVLL CKDGKSPSIF YAGREPSPSQ IADSGGSNGK KTRSKKGSNK 300 RTSASATVDL WTLLTQCAQA VASFDQRTAN ETLKQIRQHS SPYGDGLQRL AHYFADGLEK 360 RLAAGTPKFI SFQSASAADM LKAYRVYISA SPFLRMSNFL ANSTILKLAQ NESSIHIIDF 420 GISYGFQWPC LIQRLSERPG GPPKLRMMGI DLPQPGFRPA ERVEETGRWL EKYCKRFGVP 480 FEYNCLAQKW ETIRLEDLKI DRSEVTVVNC LYRLKNLSDE TVTANCPRDA LLRLIRRINP 540 NIFMHGIVNG TYNAPFFVTR FREALFHFSS LFDMFEANVP REDPSRLMIE KGLFGRDAIN 600 VIACEGAERV ERPETYKQWQ VRNQRAGFKQ LPLAQEHVNR VKEMVKKEYH KDFVVGEDGK 660 WVLQGWKGRI LFAVSSWTPA *
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |