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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.11G092000.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 410aa MW: 45785.9 Da PI: 5.5531 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.11G092000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 281.5 | 2.4e-86 | 123 | 409 | 91 | 374 |
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfe 177
f +ltaNqaIlea+++++ +Hi+Df+i qG+QW+aLlqa+a+Rp+g+p ++Ri g+ + + g +l++t++rL++fA+ l+++f+
Glyma.11G092000.1.p 123 AAFDQLTANQAILEATQTASNIHIVDFGIVQGIQWAALLQAFATRPSGKPnKIRISGIPALSLGssPGPSLSATAHRLSDFAKLLDLNFH 212
6899******************************************777769********998888999********************* PP
GRAS 178 fnvlvakrledleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysa 266
f++ + + +++l+ +++ ++ +EalaVn++lql++llde+ + + + L+l ksl+Pk+v++ e ea+ ++ F++rf a++y+sa
Glyma.11G092000.1.p 213 FTP-ILTPIHQLDRNSFCIDDtNEALAVNFMLQLYNLLDEPPTAVD---TALRLAKSLNPKIVTLGEYEASVTRFGFVNRFKTAFKYFSA 298
***.799************999****************99999888...***************************************** PP
GRAS 267 lfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee. 354
+f+sle +l+++s er vE llgr+i v+ g+ rre +e +e+Wr +e+aGF++v+ls++a +qak ll +++ s +++ e+
Glyma.11G092000.1.p 299 VFESLEPNLAADSPERFQVESLLLGRRIAAVIGGPGSVRRESMEDKEQWRVLMERAGFESVSLSHYAISQAKILLWNYSySSLFSLVESt 388
*******************************************************************************9999**99884 PP
GRAS 355 .sgslvlgWkdrpLvsvSaWr 374
g l l Wkd pL++vS+Wr
Glyma.11G092000.1.p 389 pPGFLSLAWKDVPLLTVSSWR 409
456666**************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MKCCDVICRG EEGMAAYMCA DSGNLMAIAQ QVIKQKQQQE QQQQQQQQQQ QQQHLLHHQQ 60
NPLSLHTPIP WNNTPPLGYP LPPTTDFPPD PFQPDPPFHF QPDPHSFRFS DFDSDDWMDS 120
LIAAFDQLTA NQAILEATQT ASNIHIVDFG IVQGIQWAAL LQAFATRPSG KPNKIRISGI 180
PALSLGSSPG PSLSATAHRL SDFAKLLDLN FHFTPILTPI HQLDRNSFCI DDTNEALAVN 240
FMLQLYNLLD EPPTAVDTAL RLAKSLNPKI VTLGEYEASV TRFGFVNRFK TAFKYFSAVF 300
ESLEPNLAAD SPERFQVESL LLGRRIAAVI GGPGSVRRES MEDKEQWRVL MERAGFESVS 360
LSHYAISQAK ILLWNYSYSS LFSLVESTPP GFLSLAWKDV PLLTVSSWR*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |
