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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.11G076500.1.p |
| Common Name | GLYMA_11G076500, LOC100803815 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
WOX |
| Protein Properties |
Length: 290aa MW: 32527.6 Da PI: 8.2093 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.11G076500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 62.2 | 7.6e-20 | 33 | 94 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+t+t++q+++L++l+++ r psae++++++++l +++ ++V++WFqN++a+e++
Glyma.11G076500.1.p 33 STRWTPTNDQIRILKDLYYNngIRSPSAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 94
58*****************8567*************************************97 PP
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| 2 | Wus_type_Homeobox | 112.7 | 1.9e-36 | 32 | 96 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
Glyma.11G076500.1.p 32 SSTRWTPTNDQIRILKDLYYnNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 96
789***************9779*****************************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MMEPQQQQGS QQQQQNEDAG GSGKGGFLSR QSSTRWTPTN DQIRILKDLY YNNGIRSPSA 60
EQIQRISARL RQYGKIEGKN VFYWFQNHKA RERQKKRFTF DHNNNNVPMQ QRPPTHPNPS 120
ASAWKPDPIH TKYSNISSTA GISSASSSSV EMVTVGHMGN YGYGSAPMEK SFRDCSISAG 180
GSSGHVGINH NLGWVGVDPY SSTYANFFDK IRPTDQEEEA ENFGATKIET LPLFPMHGED 240
IHGYCNLKSN SYNYDGNGWY HTEEGFKNAS RASLELSLNS YTRRSPDYD*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: In the active shoot meristem, it is specifically expressed in a small cell group underneath the presume position of stem cells. {ECO:0000269|PubMed:12208843}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). Acts in parallel with HAM. {ECO:0000269|PubMed:12208843}. |
