PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G274600.1.p
Common NameGLYMA_10G274600, LOC100306276
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 356aa    MW: 38926 Da    PI: 4.6378
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G274600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-18121169254
                  AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                          +y+GVr++k +g+W+AeIrd +    +++r++lg+f taeeA ka++  r+++e
  Glyma.10G274600.1.p 121 KYRGVRQRK-WGKWAAEIRDpF----QCTRIWLGTFNTAEEASKAYETRRLEFE 169
                          8*******9.**********55....27******************98887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.0E-17121184IPR001471AP2/ERF domain
PfamPF008473.1E-11121170IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-21121168IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-16121168IPR016177DNA-binding domain
CDDcd000183.02E-22121161No hitNo description
PROSITE profilePS5103219.216121180IPR001471AP2/ERF domain
PRINTSPR003677.4E-11122133IPR001471AP2/ERF domain
PRINTSPR003677.4E-11144160IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MSEFRKQPAS RPKQKLRQQH SSKESKAMRK LRIICDDPEA TDSSEDESER VQKPRRVKRS  60
VLEMSLPPLP QTFTTTTPDT SSCEVNSSKN ATLKVCTEGQ PQSKKRVLTH TPSTRRSTCG  120
KYRGVRQRKW GKWAAEIRDP FQCTRIWLGT FNTAEEASKA YETRRLEFEA MAKTQTLKTG  180
SEPLSTTSDK SNCCNSSAAA AADVSVSEKF STTSDDSEES MLSHNSPSSV LELDTSASKS  240
VEKGNGSTEE ATGANNLVAE LAGLEIPDLS LLNLPPPPSV AADAAGIEPN FGLDFDWLSF  300
NDYGQGFEDF GGLENIHIGG FDDTEPSELP DFDFGDFGAD EFAGWIEEPL NIPCA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-121201621356Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.456020.0somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G274600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003536685.20.0ethylene-responsive transcription factor ERF118
RefseqXP_014618907.10.0ethylene-responsive transcription factor ERF118
TrEMBLI1LEX10.0I1LEX1_SOYBN; Uncharacterized protein
STRINGGLYMA10G42130.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.24e-32ERF family protein