 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.10G236600.2.p |
Common Name | GLYMA_10G236600, LOC100790724 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
MYB |
Protein Properties |
Length: 271aa MW: 30790.8 Da PI: 9.1004 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G236600.2.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 46.7 | 7.5e-15 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEd +l + + ++G g+W++++ + g+ R +k+c++rw +yl
Glyma.10G236600.2.p 15 KGLWSPEEDNKLRNHILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYL 62
678*******************************************97 PP
|
2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++++E+e ++ ++ +lG++ W+ I+++++ gRt++++k++w++yl
Glyma.10G236600.2.p 68 RGKFSKQEEETILTLHDMLGNK-WSQISQHLP-GRTDNEIKNYWHSYL 113
89********************.*********.************997 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MGFQPMEKGK AKHKKGLWSP EEDNKLRNHI LKHGHGCWSS VPIKAGLQRN GKSCRLRWIN 60 YLRPGLKRGK FSKQEEETIL TLHDMLGNKW SQISQHLPGR TDNEIKNYWH SYLKKRVAKA 120 KEMESHNQIK YASSSSDTID SSNSIQKLAT QGQQIYNFTK ESCQSSLPKL LFAEWLSLDH 180 VNSANSVESL GLRNGFDHNS TFQEAAIHDM SEVPFGGDYN RCVSNIPAPE MFNSQLKYAN 240 QMVENGYIHC MPGFDLSSNF SMSNDAIMYI *
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed at very low level. Expressed in cauline leaves. {ECO:0000269|PubMed:11581165}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor that promotes photomorphogenesis in the light by participating in the transmission of phytochrome A (phyA) signals to downstream responses (PubMed:11581165, PubMed:19482971). Probably acts by activating expression of light-induced genes. In darkness, its degradation prevents the activation of light-induced genes (PubMed:11581165). {ECO:0000269|PubMed:11581165, ECO:0000269|PubMed:19482971}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By hormones or elicitors treatment. By exposure to abiotic stress. {ECO:0000269|PubMed:9839469}. |