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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.10G193400.1.p |
Common Name | GLYMA_10G193400, LOC100819431 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 388aa MW: 42198.2 Da PI: 9.011 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G193400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.3 | 2.2e-19 | 222 | 271 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+kGVr+++ +g+WvAeIr p++ r+r++lg+f+tae+Aa a++ a+ l+ge
Glyma.10G193400.1.p 222 FKGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEDAAIAYDTAAYILRGE 271
8******9.**********955...5************************9997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 388 aa
Download sequence Send
to blast |
MATGSKFLDN AIIRGHSHFL TASNHLHVLK SGANSSIASS PENLFSCSNP TSMKEEAPLA 60 TWISHIPAKF NVHQDIKNGK EKNQSNSIFP ASDTKNSSIP LNLLETLPPL TIAPCFDEPV 120 TSLASSSAIP KFPNLTLFLQ EPSMVYSSIS SSNIKGGEVM SATSDPSYHV SQFVQNQHQA 180 GSGDAHKMNK SLSNSQSKSF DENWLSATRT QPMKNGGRGK LFKGVRQRHW GKWVAEIRLP 240 RNRTRVWLGT FDTAEDAAIA YDTAAYILRG EYAQLNFPDL KHVIQANSLN GTTAALVEAK 300 LQAISKGGSS HRKPTDSPPG SSNKHNDENG KLKSISGKDS SIRLGAEITE RSKSTHHETS 360 DVEGVQLSRM PSLDMDIIWD ELFVSNS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031095 | 0.0 | KT031095.1 Glycine max clone HN_CCL_19 AP2-EREBP transcription factor (Glyma20g33890.1) mRNA, complete cds. |