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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.10G182100.1.p |
Common Name | GLYMA_10G182100 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
C2H2 |
Protein Properties |
Length: 186aa MW: 21090.8 Da PI: 7.195 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G182100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 11.9 | 0.00072 | 28 | 50 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C C+ +F++ Lk H +H
Glyma.10G182100.1.p 28 FRCRLCNHVFPSYQALKAHFESH 50
89*****************8887 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 186 aa
Download sequence Send
to blast |
MNNIFNNSNQ PSFFNSGQDP HQNNQNGFRC RLCNHVFPSY QALKAHFESH FTLENPAIRN 60 LFSSSHANSQ REMIPNPLQP NFPRPMVMQE TRNFVNRNFQ APPQQPMVMP QYRANLFPCA 120 IQHNVAASQP LQGPPEPQAT QFVNNNVEMA QLLAPPAIHQ MEMEVSPIDG TKPYIDLLDK 180 PINNN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235465 | 0.0 | AC235465.1 Glycine max strain Williams 82 clone GM_WBb0171K17, complete sequence. |