PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G124900.1.p
Common NameGLYMA_10G124900
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family FAR1
Protein Properties Length: 144aa    MW: 16716.8 Da    PI: 4.4758
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G124900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.38.6e-0771120253
                 FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr 53 
                          fY  Y++  GF  + +  ++   +ge+t+++f C++eg ++ ++ + e +++
  Glyma.10G124900.1.p  71 FYYWYGRANGFVCKSKVLRNC--KGETTQQNFLCYREGVKDYRDITIEMQKH 120
                          9**********9888887777..8889**************99988333332 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-471124IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MDIHDDRSGE DNEVARGIED ASHLDGAFEE KVSEKIVINI LLDIVNINLT NIDSNDVKRF  60
DFVDLSVAYL FYYWYGRANG FVCKSKVLRN CKGETTQQNF LCYREGVKDY RDITIEMQKH  120
EEKMIQDVIV DMTKFDIEFK TQV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G124900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLK7LJ071e-100K7LJ07_SOYBN; Uncharacterized protein
STRINGGLYMA10G24625.11e-101(Glycine max)