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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.10G095100.1.p |
| Common Name | GLYMA_10G095100, LOC100776343 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
C2H2 |
| Protein Properties |
Length: 387aa MW: 43839.2 Da PI: 6.3489 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.10G095100.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.4 | 0.00011 | 313 | 335 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C +Cgk F + + ++H +++
Glyma.10G095100.1.p 313 FMCRKCGKAFAVRGDWRTHEKNC 335
89*****************9987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MADPYSNFFS PLGSNFFHYP SPSPSSQHHH PYAHNFLNQN GSNIINNNHN TFFHFHNFQT 60
TICSSFSSSS SPPSPPLRVA LPLLTLSPKN EEEQEEDDDQ EQDQDHEILQ DNFCTAMDVE 120
ENYNNNRTLL HHLHPKEEEQ DQEDGPDETV TVALHIGLPS PSAAEIASVL SSACSTDQEQ 180
QQQQQQQDGN NNNNGSDDFS SSGFLSNRLN KGQYWIPTPS QILIGPTQFS CPVCCKTFNR 240
YNNMQMHMWG HGSQYRKGPE SLRGTQPTGM LRLPCYCCSP GCRNNIDHPR AKPLKDFRTL 300
QTHYKRKHGI KPFMCRKCGK AFAVRGDWRT HEKNCGKLWY CICGSDFKHK RSLKDHIKAF 360
GSGHAAYGID GFEEEEEPAS EVEQDR*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in developing carpels (PubMed:17600712). Expressed in the shoot apical meristem and the replum (PubMed:25039392). {ECO:0000269|PubMed:17600712}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
