PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G093600.1.p
Common NameGLYMA_10G093600, LOC100810862
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 358aa    MW: 39024.8 Da    PI: 7.0288
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G093600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.4e-09202249455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++iN ++  L+el+P +    +k    a +L k +++++sLq
  Glyma.10G093600.1.p 202 SHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDKIINHVQSLQ 249
                          8*************************9....899999*************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.04E-9196253No hitNo description
SuperFamilySSF474599.42E-15196267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.462198248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-14199262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-6202249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-8204254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MEQTTLEAIQ FNEEIQGLMA APAPETVNSF KALLELPSTQ AVELLHSPER ARKPLRHSPK  60
PPTPPPPHPP TSPSFTASAS AATANLTFPS NAALIERAAR FSVFAGQNSN SNSNSPEVKR  120
ELPETDSNPS STHGGGGGGS VSDLAMENKN PKTAKRKERE KKVKASSRKS KSVAAATDES  180
SGDGEKLPYV HVRVRRGQAT DSHSLAERAR REKINARMKL LQELVPGCNK ISGTALVLDK  240
IINHVQSLQN EVEILSMKLA AVNPVIDFNL DSLLATEGVT PMDCNFPPTV APVMWPEIPQ  300
NGNRQQYQQP WQFDAFHQPL WGREEDNTNM TPENSLWSYD SSANSVSLHS NQLKMEL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.255170.0cotyledon| hypocotyl| meristem| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G093600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003535851.10.0transcription factor bHLH48 isoform X1
TrEMBLI1L9V50.0I1L9V5_SOYBN; Uncharacterized protein
STRINGGLYMA10G12210.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49852945
Representative plantOGRP5816313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.27e-84bHLH family protein