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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.10G077000.1.p |
| Common Name | GLYMA_10G077000, LOC100802373 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
NAC |
| Protein Properties |
Length: 129aa MW: 14785.9 Da PI: 9.8487 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.10G077000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 131.8 | 4.8e-41 | 11 | 128 | 1 | 120 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrFh + eel+v+yL++kv++++l++ ++i+e+d+y+++Pw+Lp+ + +e+ewyfF++rd+ky++g r+nrat+sgyWk tg+dk
Glyma.10G077000.1.p 11 LPPGFRFHLSYEELIVHYLRNKVTSSPLPA-SFIAEIDLYNYNPWELPTLF--GEDEWYFFTPRDRKYPNGVRPNRATTSGYWKPTGTDK 97
79****************************.89***************544..789********************************** PP
NAM 91 evlsk.kgelvglkktLvfykgrapkgektd 120
+++++ + + + +kk Lvfykgr pkg+ktd
Glyma.10G077000.1.p 98 PIFTScGMKSITVKKALVFYKGRPPKGSKTD 128
****977788*******************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 129 aa
Download sequence Send
to blast |
MDKDANSKIQ LPPGFRFHLS YEELIVHYLR NKVTSSPLPA SFIAEIDLYN YNPWELPTLF 60
GEDEWYFFTP RDRKYPNGVR PNRATTSGYW KPTGTDKPIF TSCGMKSITV KKALVFYKGR 120
PPKGSKTD*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed during pollen development and maturation. {ECO:0000269|PubMed:21107887}. |
| Uniprot | TISSUE SPECIFICITY: Expressed specifically in the tapetum. {ECO:0000269|PubMed:21107887}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC235460 | 5e-89 | AC235460.1 Glycine max strain Williams 82 clone GM_WBb0169H15, complete sequence. |
