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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.10G076100.1.p |
Common Name | GLYMA_10G076100, LOC100795470 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
B3 |
Protein Properties |
Length: 338aa MW: 38494 Da PI: 6.964 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G076100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 104.4 | 5.9e-33 | 73 | 178 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83
f+k ltpsdv+k++rlv+pk++ae++ gg++ ++ l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+v+F+
Glyma.10G076100.1.p 73 FEKPLTPSDVGKLNRLVIPKQHAEKYfplsgdsGGSECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFE 162
99******************************988888999************************************************* PP
E-SSSEE..EEEEE-S CS
B3 84 ldgrsefelvvkvfrk 99
+++ + ++l+++++r+
Glyma.10G076100.1.p 163 RHRVDAQRLFIGWRRR 178
87779999******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MSINHYSMDL PEPTLWWPHP HHQQQQLTLM DPDPLRLNLN SDDGNGNDND NDENQTTTTG 60 GEQEILDDKE PMFEKPLTPS DVGKLNRLVI PKQHAEKYFP LSGDSGGSEC KGLLLSFEDE 120 SGKCWRFRYS YWNSSQSYVL TKGWSRYVKD KRLDAGDVVL FERHRVDAQR LFIGWRRRRQ 180 SDAALPPAHV SSRKSGGGDG NSNKNEGWTR GFYSAHHPYP THHLHHHQPS PYQQQHDCLH 240 AGRGSQGQNQ RMRPVGNNSS SSSSSSRVLR LFGVDMECQP EHDDSGPSTP QCSYNSNNML 300 PSTQGTDHSH HNFYQQQPSN SNPSPHHMMV HHQPYYY*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 4e-49 | 66 | 178 | 1 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 4e-49 | 66 | 178 | 1 | 113 | B3 domain-containing transcription factor NGA1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 8e-87 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |