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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.10G059700.1.p |
Common Name | GLYMA_10G059700, LOC100785596 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
C2H2 |
Protein Properties |
Length: 299aa MW: 32975.8 Da PI: 8.9112 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G059700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 11.2 | 0.0012 | 118 | 140 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C+++F++ L H +H
Glyma.10G059700.1.p 118 YQCKTCNRCFPSFQALGGHRASH 140
9***********99999998887 PP
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2 | zf-C2H2 | 13.7 | 0.00018 | 204 | 226 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++Cg Fs+ L H+r+H
Glyma.10G059700.1.p 204 HECSICGAEFSSGQALGGHMRRH 226
78********************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MQVQEELLVV SKDHTQMMMV KGKRTKRQRA PSPLRLAMPY NSTSSNSSTN NSIDSATTSS 60 PSPSPTNNTI EFREDQDMAN CLILLAQGRY HVAAPTPHHN NNNNDDDNLK KSTSLYLYQC 120 KTCNRCFPSF QALGGHRASH KKPKQNGTFS SEAVTNFIEE NNDRYDPTTS TTLSLKTPNG 180 VSNLCGTITA TTTTTTTTKA NKVHECSICG AEFSSGQALG GHMRRHRTLV NASMTTSMRG 240 GNVVGSNEFQ EAKKPLKLDL NLPALPEDDH HRESKFSFQQ REKNVIVFSK SSLVDCHY*
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