 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.10G004000.1.p |
| Common Name | GLYMA_10G004000 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
C2H2 |
| Protein Properties |
Length: 176aa MW: 19473.8 Da PI: 4.8785 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.10G004000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.5 | 0.00045 | 23 | 43 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23
C C+++F++ L +H +H
Glyma.10G004000.1.p 23 CRLCNQVFTDTQALLTHVESH 43
99***************9998 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MANNFYNNAQ FAGFYNNTDP KGCRLCNQVF TDTQALLTHV ESHMAQEEDS LRRLNSSPPN 60
VNSQMQLGSQ QFPPQPAMGD GRNFQAQSQP MRMPQPISKN PIFNSSQIGS SSTPIRQMQV 120
SPQAFPFSGS INGDGSKPYI SKLEKPIKKI DFIDLVNMDG DDNLEVEAMD LDLKL*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC235871 | 1e-144 | AC235871.2 Glycine max clone GM_WBb0132A17, complete sequence. |
