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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.10G003100.1.p |
Common Name | GLYMA_10G003100, LOC100806789 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
HSF |
Protein Properties |
Length: 338aa MW: 39122.8 Da PI: 4.3526 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G003100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 111.5 | 6e-35 | 38 | 129 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91
Fl+k+y+i++d +++e++sws+ +nsfvv+d++ f+ ++Lp+yF+h+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k
Glyma.10G003100.1.p 38 FLTKTYDIVDDVSTDEIVSWSRGNNSFVVWDPQAFSVTLLPRYFEHNNFSSFVRQLNTYGFRKVDPDK---------WEFANEGFLRGQK 118
9****************************************************************999.........************* PP
XXXXXXXXXXX CS
HSF_DNA-bind 92 ellekikrkks 102
+ll++i+rkk+
Glyma.10G003100.1.p 119 HLLKNIRRKKT 129
********986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MNPNNDGPMI LVKEEFPEGV AIAPQPLEGL HEIGPPPFLT KTYDIVDDVS TDEIVSWSRG 60 NNSFVVWDPQ AFSVTLLPRY FEHNNFSSFV RQLNTYGFRK VDPDKWEFAN EGFLRGQKHL 120 LKNIRRKKTL TNQQQALPID HCVEVGRFGS LDGEVDALRR DKQVLMVELV KLRQQQQNTR 180 NNLQSMENRL KRTQKQQQQM MKFLTRAMQN PNFLQQLVQQ REWRKDLEEA ATFSNKRIRS 240 DVEECSSFVK LEHEEEHNND ITSSELEVSD MDLVIMNTEE EEEKLLGAEI ESINEEVLWE 300 ELLNEGTEED VLIGLEEDDE DIVVLAEELG YLASTPK*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |