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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.09G241800.1.p |
Common Name | GLYMA_09G2418001, LOC100804456 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
HD-ZIP |
Protein Properties |
Length: 230aa MW: 25443.4 Da PI: 8.3781 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.09G241800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 61.1 | 1.7e-19 | 68 | 122 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq +Lee F+++++++ ++++ LA++l+L+ rqV vWFqNrRa+ k
Glyma.09G241800.1.p 68 RKKLRLTKEQSMVLEETFKEHSTLNPKRKQALAEELNLKPRQVEVWFQNRRARTK 122
78889************************************************98 PP
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2 | HD-ZIP_I/II | 127.8 | 4.5e-41 | 68 | 157 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rl+keq+ +LEe+F+e+++L+p+rK++la+eL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr+y++l+een+rL+kev+eLr +
Glyma.09G241800.1.p 68 RKKLRLTKEQSMVLEETFKEHSTLNPKRKQALAEELNLKPRQVEVWFQNRRARTKLKQTEVDCEYLKRCYENLTEENRRLHKEVQELR-A 156
69*************************************************************************************9.5 PP
HD-ZIP_I/II 91 l 91
l
Glyma.09G241800.1.p 157 L 157
5 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MIRGIDVNSA AECDGVSSPN SAVSSVSGGD GKQSERDDDN NAAAVAGERT SCSRGSDDDD 60 GGGSDASRKK LRLTKEQSMV LEETFKEHST LNPKRKQALA EELNLKPRQV EVWFQNRRAR 120 TKLKQTEVDC EYLKRCYENL TEENRRLHKE VQELRALKLS PQMYMHMNPP TTLTICPSCE 180 RTHSFASSST ATIHSAVAAT SSNRKLFGTN IRLPVSFNTR PFEGPIPRP*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 66 | 72 | SRKKLRL |
2 | 116 | 124 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |