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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.09G212500.1.p |
Common Name | GLYMA_09G212500, LOC100777524 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GRF |
Protein Properties |
Length: 338aa MW: 37342.6 Da PI: 9.1016 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.09G212500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 69.1 | 5.6e-22 | 68 | 112 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45
d+epgrCrRtDGKkWRCsr++ +++k+C+rH+ r r rsrk++e+
Glyma.09G212500.1.p 68 DPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVES 112
79****************************************997 PP
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2 | QLQ | 57.7 | 3.5e-20 | 14 | 49 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
+FTaaQ+++L++Q+l++KyL a++ vPp+Ll++i+k
Glyma.09G212500.1.p 14 PFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRK 49
9*********************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MSVPPPSTAA MWTPFTAAQW HELEHQALIF KYLKAGLSVP PDLLLPIRKS LQLISSHPSM 60 GYYGKKIDPE PGRCRRTDGK KWRCSRDAHP DSKYCDRHMI RRRYRSRKPV ESSQTHSSSS 120 ASAASSNSNP VAAGGGGGSV ANVSATAAKN LHTLPLHING AREGFTFTLG NNTSTNTNTN 180 TNTLPHLHMN PLTLSADNTK KTYRFGLNSE ADEHNVLQKD LGSVRYQGYD FTSDAMWSQM 240 SHIPSNTVSE SRIGSTMLGN CFQHQTMRDA ELLNLETART KDLVFSGQLS SAGGMKQEYQ 300 SPQSLFSDWD WKKDLSSSAL EYRPNKDFNC NPDVNVD*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 1e-146 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |