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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.09G201000.1.p | ||||||||
Common Name | GLYMA_09G201000, LOC100777894 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | Dof | ||||||||
Protein Properties | Length: 343aa MW: 36975.4 Da PI: 8.5597 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.7 | 1.4e-39 | 34 | 94 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ l+cprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk++ Glyma.09G201000.1.p 34 QEQGLNCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVK 94 57889*****************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 5.9E-33 | 36 | 92 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 3.0E-26 | 37 | 92 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.357 | 38 | 92 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 40 | 76 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence Send to blast |
MSPDDTPSKP ATAKDQETQS SGGSGRKSSS TRPQEQGLNC PRCDSPNTKF CYYNNYSLTQ 60 PRHFCKTCRR YWTKGGALRN VPIGGGCRKN KKVKSSRLSC DSKDSGSSSS EVGGLKFLHS 120 LSPSMDFHLG GLPFPRLHHH HHPPTTYNHF SSFENTSSTS SCFNLDPSPG TTTTLSSSFA 180 ALYNYPFSYN GAIQGMSSLN VHSGLASSIE SLSSINQDLH WKLQQQRLAM LFGGDNNQKD 240 HSGVNQIENQ TQKPQTILFQ NLEISKPGTF PVGDSRKEHG PSGDTHTPST EWFFGNSYAS 300 VTPTPTSSGG GPGNNDNASN WSSGGGGVHA WGDVPQQYSS LP* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.09G201000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003534250.1 | 0.0 | dof zinc finger protein DOF5.7 | ||||
Refseq | XP_028180270.1 | 0.0 | dof zinc finger protein DOF5.7-like | ||||
TrEMBL | A0A445J3P2 | 0.0 | A0A445J3P2_GLYSO; Dof zinc finger protein DOF5.7 | ||||
TrEMBL | I1L4T3 | 0.0 | I1L4T3_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA09G33350.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3854 | 34 | 60 |
Representative plant | OGRP38 | 17 | 445 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 1e-33 | TARGET OF MONOPTEROS 6 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.09G201000.1.p |
Entrez Gene | 100777894 |