PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G184100.1.p
Common NameGLYMA_09G184100, LOC100780030
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family NAC
Protein Properties Length: 332aa    MW: 37151.1 Da    PI: 8.5837
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G184100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.91.2e-5451311129
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                          lppGfrFhPtdeel+++yL++kv++++++  ++i+ vd+ k+ePwdLp k++ ++kewyfFs rd+ky+tg r+nrat+sgyWk+tgkdk
  Glyma.09G184100.1.p   5 LPPGFRFHPTDEELITCYLTRKVSDSSFTS-KAIAVVDLKKSEPWDLPGKASMGKKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDK 93 
                          79*************************999.88***************9888999*********************************** PP

                  NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                          e+++  g lvg+kktLvfy+grap+gek++Wvmheyrle
  Glyma.09G184100.1.p  94 EIFR-AGVLVGMKKTLVFYRGRAPRGEKSNWVMHEYRLE 131
                          ****.999*****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-633151IPR003441NAC domain
PROSITE profilePS5100559.8195151IPR003441NAC domain
PfamPF023657.1E-296130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MEENLPPGFR FHPTDEELIT CYLTRKVSDS SFTSKAIAVV DLKKSEPWDL PGKASMGKKE  60
WYFFSLRDRK YPTGLRTNRA TESGYWKTTG KDKEIFRAGV LVGMKKTLVF YRGRAPRGEK  120
SNWVMHEYRL ENKNHFRPSK DEWVVCRVFQ KSLQMKRPQQ TPPSQPESPC DTASMVNEFG  180
DVELPNLINN IANSSSDGIT NNISGQTFFN ADLINSVNTN MNLTMNWPVA SEVIQVPTLP  240
SLPWPSGLLN PSISVNSLLL KALQLRSYQQ IEAAAAAATD HLIASYMPQG VSQHVGTNLI  300
SSSLTASSSS KVLECVPQQQ QEQPFNLDSI W*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-55415116165NO APICAL MERISTEM PROTEIN
1ut4_B1e-55415116165NO APICAL MERISTEM PROTEIN
1ut7_A1e-55415116165NO APICAL MERISTEM PROTEIN
1ut7_B1e-55415116165NO APICAL MERISTEM PROTEIN
3swm_A1e-55415119168NAC domain-containing protein 19
3swm_B1e-55415119168NAC domain-containing protein 19
3swm_C1e-55415119168NAC domain-containing protein 19
3swm_D1e-55415119168NAC domain-containing protein 19
3swp_A1e-55415119168NAC domain-containing protein 19
3swp_B1e-55415119168NAC domain-containing protein 19
3swp_C1e-55415119168NAC domain-containing protein 19
3swp_D1e-55415119168NAC domain-containing protein 19
4dul_A1e-55415116165NAC domain-containing protein 19
4dul_B1e-55415116165NAC domain-containing protein 19
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.202220.0root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G184100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003534169.10.0NAC domain-containing protein 100
TrEMBLI1L4C50.0I1L4C5_SOYBN; Uncharacterized protein
STRINGGLYMA09G31650.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49463356
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-111NAC domain containing protein 58