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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.09G147200.1.p |
Common Name | GLYMA_09G147200 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 328aa MW: 37111.1 Da PI: 8.7841 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.09G147200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.3 | 1.7e-17 | 156 | 206 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr++ + +Wv+e+r+p +k++r++lg+f t+e+Aa+a++ a+ +l+g
Glyma.09G147200.1.p 156 PVYRGVRRRN-SDKWVCEVREP---NKKTRIWLGTFPTPEMAARAHDVAAMALRG 206
68*****888.8******9998...347*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MLPSLPFIYY IYPSLTLSLF SSSTKTTQHS NSISIITKKK EKRISNTLFI IKTLSSLFPY 60 QNPFPQHYSL QYKKPFFNLV STAHTHTHIY IYSMFTLNHS SDLYHVSPEL SSSLDTSSPA 120 SEGSRGVAFS DEEVRLAVRH PKKRAGRKKF RETRHPVYRG VRRRNSDKWV CEVREPNKKT 180 RIWLGTFPTP EMAARAHDVA AMALRGRYAC LNFADSAWRL PVPATAEAKD IQKAAAEAAQ 240 AFRPDQTLKN ANTRQECVEA VAVAVAETTT ATAQGVFYME EEEQVLDMPE LLRNMVLMSP 300 THCLGYEYED ADLDAQDAEV SLWNFSI*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates abscisic acid- and dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation. {ECO:0000269|PubMed:11798174, ECO:0000269|PubMed:12376631}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By high-salt stress, drought stress and abscisic acid (ABA) treatment. {ECO:0000269|PubMed:11798174, ECO:0000269|PubMed:12376631}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235384 | 0.0 | AC235384.1 Glycine max strain Williams 82 clone GM_WBb0112F14, complete sequence. |
GenBank | EU365376 | 0.0 | EU365376.1 Glycine max cultivar Stout CRT binding factor 1 and PERLD1 genes, complete cds. |
Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Guttikonda SK, et al.
Overexpression of AtDREB1D transcription factor improves drought tolerance in soybean. Mol. Biol. Rep., 2014. 41(12): p. 7995-8008 [PMID:25192890] - Zhang T, et al.
Overexpression of a NF-YB3 transcription factor from Picea wilsonii confers tolerance to salinity and drought stress in transformed Arabidopsis thaliana. Plant Physiol. Biochem., 2015. 94: p. 153-64 [PMID:26093308] - Carlow CE, et al.
Nuclear localization and transactivation by Vitis CBF transcription factors are regulated by combinations of conserved amino acid domains. Plant Physiol. Biochem., 2017. 118: p. 306-319 [PMID:28675818] - Li B, et al.
Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis. Plant Cell, 2018. 30(1): p. 178-195 [PMID:29317470]
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