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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.09G109700.1.p |
Common Name | GLYMA_09G109700, LOC100776113 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
HD-ZIP |
Protein Properties |
Length: 328aa MW: 36191.6 Da PI: 7.99 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.09G109700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 55 | 1.4e-17 | 164 | 218 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F+++ +++ +++ LAk+l+L rqV vWFqNrRa+ k
Glyma.09G109700.1.p 164 RKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 218
778899***********************************************98 PP
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2 | HD-ZIP_I/II | 127.2 | 7.3e-41 | 164 | 254 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +
Glyma.09G109700.1.p 164 RKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-A 252
69*************************************************************************************9.5 PP
HD-ZIP_I/II 91 lk 92
lk
Glyma.09G109700.1.p 253 LK 254
55 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MELALSLGDT SKSFTFLDKA VTLPPNKDPP GFCLAPSFAE KRSDSERGTA SGSSDPPVQL 60 DLLPFSPVLR PQQHPPSHLR IPWLTQACGG AARVLDVNLF PAATAEDGDD GTSLSSSPNS 120 AVSPFQMDFC TRNGNAAEFG SRNKREQQEA EGRASDDDEN GSTRKKLRLS KEQSAFLEES 180 FKEHTTLNPK QKLALAKQLN LRPRQVEVWF QNRRARTKLK QTEVDCEYLK RCCETLTEEN 240 RRLQKELQEL RALKSSQPFY MQLPATTLTM CPSCERVATN STTTNQTSIV NNNASSQIPV 300 ELSLSKPRIL PFPNGQVQAQ AHQIASS*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 162 | 168 | TRKKLRL |
2 | 212 | 220 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 1e-100 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |