PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G029800.4.p
Common NameGLYMA_09G029800, LOC100805707
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 483aa    MW: 52580.5 Da    PI: 6.4253
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G029800.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.86.9e-31268326259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Glyma.09G029800.4.p 268 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRNDPNMLVITYTSEHNHP 326
                          699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.822262328IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.6E-31262328IPR003657WRKY domain
SuperFamilySSF1182902.09E-26265328IPR003657WRKY domain
SMARTSM007741.2E-37267327IPR003657WRKY domain
PfamPF031067.5E-26269326IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    Send to blast
MYCSSIIMDN YQGDLTDILR ASGGAYGSTG TGTGTSSSDQ LHTTSHHHHH SSSHTTLSHN  60
DHWHHHQHFS SSSSDPPITF SSSSSVLIQD TNFGDPFSTM RDPFLQELDM PSASAYFTGG  120
ALELEAAATF GSVTNNTTSS TTATTVFATA HKILEEHDNN NMRRPCKNIF SNMIQISPNA  180
KLPISPYDST NTAMAPSPRP IKPPALVSPN MVMNANTSKE CLVDTTGVQI SSPRNPGLKR  240
RKNQAKKVVC IPAPAAANSR QTGEVVPSDL WAWRKYGQKP IKGSPYPRGY YRCSSSKGCS  300
ARKQVERSRN DPNMLVITYT SEHNHPWPKQ RNALAGSTRS QPSKNNNNAA ASNSKNSEGS  360
NSQKGTATKA KDDEESNNYN NSSEGNVSPV VAGNSSNSVK EENMEDIEKH QIEMDEGEFS  420
DGIPYKPSLM DHQSTNNQQS EDFFAELGEI EADPLDLLFT QGFGGADDQR ESKALDPFHL  480
FD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B8e-24242328279Disease resistance protein RRS1
5w3x_D8e-24242328279Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G029800.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003534796.20.0probable WRKY transcription factor 14 isoform X1
RefseqXP_006586862.10.0probable WRKY transcription factor 14 isoform X2
TrEMBLA0A0R0I3120.0A0A0R0I312_SOYBN; Uncharacterized protein
TrEMBLA0A0R0I3180.0A0A0R0I318_SOYBN; Uncharacterized protein
TrEMBLK7LBI70.0K7LBI7_SOYBN; Uncharacterized protein
STRINGGLYMA09G03451.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.12e-83WRKY DNA-binding protein 14