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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.08G346300.1.p |
Common Name | GLYMA_08G346300, Glyma08g46040.1, LOC100812081 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 587aa MW: 63804.8 Da PI: 6.5095 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.08G346300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 28 | 4e-09 | 396 | 443 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq
Glyma.08G346300.1.p 396 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 443
8*************************9....677*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 587 aa
Download sequence Send
to blast |
MENQFFLNAG VPPQLHFEPS PHHHHHHLCP PPSWQSSLSS AMDVQVTVLN CSTEQNPDCF 60 YNNTPTWDKS TDHHGLQFDS ALSSMVSSPA ASNSNMSSEN FVIRELIGKL GNIGAGSDEI 120 EISPHSQPLV GASSYINCNN NSTNTSCYST PLSSSPKVNM NKIPTMVKHL VKEGMPLSLG 180 TSTSLNSTVA EFSADPGFAE RAAKLSCFGS RSFNGRTTQL CLNIAELAQR SSPLVENGKK 240 QLPRVSSSPS LKVLGSQMGT QENKNSPLQD LMEVANSQEE SAISEQTPNG DTGEKPSPYV 300 NSRKRKGPSK GKAKETSTST NPPMAAEASD DSNAKRSKPN EGEGNENGQV KAEEESKGGN 360 NSNANDEKQN KSNSKPPEPP KDYIHVRARR GQATDSHSLA ERVRREKISE RMKLLQDLVP 420 GCNKVTGKAL MLDEIINYVQ SLQRQVEFLS MKLASVNTRL DFSIESLISK DIFQSNNSLA 480 QPIFPIDSSA PPFYGQQTQP NPAIHNNIPN GTMTHNSVDP LDTGMCQNLG MHLPHLNGFN 540 EGGFQYPITF SEDDLHTIVQ MGFGQTANRK TPIQSQSFNG SNQEPL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031113 | 0.0 | KT031113.1 Glycine max clone HN_CCL_101 bHLH transcription factor (Glyma08g46040.1) mRNA, partial cds. |