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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.08G342800.1.p |
Common Name | GLYMA_08G342800 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
FAR1 |
Protein Properties |
Length: 143aa MW: 15811 Da PI: 5.7217 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.08G342800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 54.2 | 4.8e-17 | 55 | 127 | 18 | 90 |
FAR1 18 kskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
+ ++ +g++ r++ C+k+g++ ++ e++ r++ r gCka++ vk+ek+gkw+vt+++++HnH+l
Glyma.08G342800.1.p 55 QRRRFGIDGRTLARRLGCNKQGFSPNNMGILGPEKKLRPSAREGCKATILVKLEKSGKWVVTRFVKDHNHPLI 127
555667789999***************9999****************************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009585 | Biological Process | red, far-red light phototransduction |
GO:0010018 | Biological Process | far-red light signaling pathway |
GO:0042753 | Biological Process | positive regulation of circadian rhythm |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 143 aa
Download sequence Send
to blast |
MDFVVVDSDN GNEAEHSCLE ESTSIFEGVE VQEPYVGMEF DSEEDAREIC CTIMQRRRFG 60 IDGRTLARRL GCNKQGFSPN NMGILGPEKK LRPSAREGCK ATILVKLEKS GKWVVTRFVK 120 DHNHPLIATA NGFSTAVSFL LV*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 6e-92 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |