PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.08G333500.1.p
Common NameGLYMA_08G333500
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 388aa    MW: 44242 Da    PI: 6.0384
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.08G333500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.51.3e-07113156447
                          S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          WT eE++ ++ + + +  + Wk I+++    +t+ q+ s+ qky
  Glyma.08G333500.1.p 113 WTIEEHKSFLFGLEIMKEKGWKQISEKYVPSKTASQVASHAQKY 156
                          *************************99998*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.694105161IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.1E-6106160IPR009057Homeodomain-like
SuperFamilySSF466894.6E-12107160IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-10108159IPR006447Myb domain, plants
SMARTSM007170.0082109159IPR001005SANT/Myb domain
PfamPF002492.1E-5112156IPR001005SANT/Myb domain
CDDcd001674.41E-4113157No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MSDYYFDEEE IQELLKENDA PVSDDFFNDF AAQDSSPPAD EILPADEVLD PPPVPTSHMV  60
HSSATAPDPA PHLVPSEETL PSSHPHPLLP QNMESNHVML SGDSSHHKKY EHWTIEEHKS  120
FLFGLEIMKE KGWKQISEKY VPSKTASQVA SHAQKYIKRK NTPSKERKRR SIHDTTLDDM  180
DIIRIDQHNW VPSTPNFMVQ PHTLSTHQHN WVPPPPPNFA VQPRTPHVDQ DNWVSPPSNL  240
AVQPPTPHID QHNWVPSPPN FAVQPPTPHI DQHNLVPSPP NFAVQPPTPH IDQHNWVPSP  300
PNFAPHTSLI DQDNWVPTPP DFAVQPHEMQ RAQHMQQFNL HSSSPQMDEY RNFNSGHPQN  360
ELDLIAQQIL EYKKNKFNHK NNEGPSR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.08G333500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006601664.11e-147myb-like protein J
TrEMBLA0A0R0J1R50.0A0A0R0J1R5_SOYBN; Uncharacterized protein
STRINGGLYMA08G45255.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3571722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.16e-17MYB family protein