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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.08G278800.1.p |
Common Name | GLYMA_08G278800 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 181aa MW: 20423.4 Da PI: 10.7904 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.08G278800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 49.7 | 9.1e-16 | 3 | 52 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr ++ +gr+++eIrdps+ + r++lg+f+tae +a++ a++++ g
Glyma.08G278800.1.p 3 HFRGVRKRP-WGRYASEIRDPSK---KSRVWLGTFDTAEATTRAYDVAAREFCG 52
69*******.**********965...6**********************99866 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 181 aa
Download sequence Send
to blast |
MVHFRGVRKR PWGRYASEIR DPSKKSRVWL GTFDTAEATT RAYDVAAREF CGPKTKTNFP 60 LPLENPRLRR LRRSLASRPQ PCPRRSRIRS IPLPALYRRG AAANPFLYYD VVLCAGMGGP 120 RGFAFGYNHH PVAATEFHAT TSDLDSSSSS VIDLMKVKGK FPESSIQIRI NEDALYNIFY 180 *
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.34955 | 1e-74 | cotyledon| epicotyl| flower| hypocotyl| leaf| meristem| root| stem |
Gma.6380 | 1e-74 | cotyledon| epicotyl| flower| hypocotyl| leaf| meristem| pod| root| seed coat| somatic embryo |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC236210 | 1e-107 | AC236210.2 Glycine max clone GM_WBc0012G22, complete sequence. |