PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.08G149200.1.p
Common NameGLYMA_08G149200
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 339aa    MW: 37636.5 Da    PI: 4.5421
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.08G149200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.94e-16100148254
                  AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                          +y+GVr++k +g+W+AeI+  +     + +r+++g+f taeeA +a++a r+++e
  Glyma.08G149200.1.p 100 KYRGVRQRK-WGKWAAEIYNpF-----QsTRIWIGTFSTAEEASQAYEARRLEFE 148
                          8*******9.********9955.....35*******************9999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.6E-1999148IPR001471AP2/ERF domain
SMARTSM003803.7E-13100154IPR001471AP2/ERF domain
CDDcd000182.89E-21100147No hitNo description
SuperFamilySSF541714.77E-15100147IPR016177DNA-binding domain
PfamPF008471.2E-11100149IPR001471AP2/ERF domain
PROSITE profilePS5103218.9100157IPR001471AP2/ERF domain
PRINTSPR003672.0E-10101112IPR001471AP2/ERF domain
PRINTSPR003672.0E-10123139IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MAESQKQPAS RPKQKLHSMQ EPKAMRKLHI ICNDPDATDS SEDELERIQN PRRVKRSACE  60
IPLPHTFTTP EMRVSTKDQP QSKKRALTHT PSARRNTSRK YRGVRQRKWG KWAAEIYNPF  120
QSTRIWIGTF STAEEASQAY EARRLEFEAM AKAQAYKTGS RSAAEPLATT SEKSNCRNSS  180
SAAAAVDVSV SEKVSTTSDD SDKSVLSHNS PLSVLELDTP ASKFIEMGNV STDEAIEANN  240
LVDELAELEI PDLNLLNLPP PPSAAVPSEI EPNFGLDFDW LSFDDYGQGF DDFGGLEDIH  300
ICGFDDNEPS ELPDFDFGDF GADEFSGWTE DPLNIHYA*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.08G149200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028242648.10.0ethylene-responsive transcription factor ERF118-like
TrEMBLA0A0R0IM740.0A0A0R0IM74_SOYBN; Uncharacterized protein
TrEMBLA0A445JEU30.0A0A445JEU3_GLYSO; Ethylene-responsive transcription factor ERF118
STRINGGLYMA08G15830.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-29ERF family protein